Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate carboxypeptidase | SAMEA1710551_03307 | Not Available | Negative | 3608522 - 3609907 | 51279.4 |
| uncharacterized membrane protein | SAMEA1710551_03308 | Not Available | Negative | 3610080 - 3610823 | 27657.0 |
| acetylornithine deacetylase arge | SAMEA1710551_03309 | Not Available | Negative | 3610843 - 3612105 | 46671.4 |
| abc transporter ribose-specific permease | SAMEA1710551_03310 | Not Available | Negative | 3612289 - 3613287 | 34421.6 |
| abc transporter ribose-specific atp-binding protein | SAMEA1710551_03311 | Not Available | Negative | 3613271 - 3614782 | 56534.0 |
| abc transporter ribose-specific extracellular solute-binding protein | SAMEA1710551_03312 | Not Available | Negative | 3614835 - 3615797 | 34483.4 |
| ribokinase, pfkb family | SAMEA1710551_03313 | Not Available | Negative | 3615845 - 3616738 | 32500.8 |
| ribose operon repressor | SAMEA1710551_03314 | Not Available | Negative | 3616780 - 3617793 | 37969.7 |
| biotin synthase | SAMEA1710551_03315 | Not Available | Negative | 3618021 - 3618998 | 36800.4 |
| uncharacterised protein | SAMEA1710551_03316 | Not Available | Negative | 3619204 - 3619467 | 10439.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
