Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus-assembly protein | SAMEA1710551_03287 | Not Available | Positive | 3586815 - 3588164 | 50631.7 |
| type ii secretion system protein | SAMEA1710551_03288 | Not Available | Positive | 3588335 - 3589420 | 40957.1 |
| type iv pilin pila | SAMEA1710551_03289 | Not Available | Positive | 3589474 - 3589824 | 12611.2 |
| pilus assembly protein | SAMEA1710551_03290 | Not Available | Positive | 3589878 - 3590750 | 34642.4 |
| uncharacterised protein | SAMEA1710551_03291 | Not Available | Positive | 3590751 - 3591194 | 17517.6 |
| uncharacterised protein | SAMEA1710551_03292 | Not Available | Positive | 3591209 - 3591793 | 22887.6 |
| protein translocase | SAMEA1710551_03293 | Not Available | Positive | 3592046 - 3593083 | 40174.1 |
| uncharacterised protein | SAMEA1710551_03294 | Not Available | Positive | 3593164 - 3593529 | 13710.4 |
| uncharacterised protein | SAMEA1710551_03295 | Not Available | Positive | 3593534 - 3593851 | 12408.0 |
| oxidoreductase, fad dependent | SAMEA1710551_03296 | Not Available | Positive | 3593899 - 3595503 | 59402.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
