Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | SAMEA1710551_03266 | Not Available | Negative | 3566319 - 3566534 | 8482.31 |
| uncharacterised protein | SAMEA1710551_03267 | Not Available | Negative | 3567022 - 3567207 | 7012.16 |
| uncharacterised protein | SAMEA1710551_03268 | Not Available | Negative | 3567228 - 3567425 | 7717.68 |
| uncharacterised protein | SAMEA1710551_03269 | Not Available | Negative | 3567481 - 3567753 | 10373.7 |
| transporter, major facilitator superfamily (mfs) | SAMEA1710551_03270 | Not Available | Negative | 3568068 - 3568658 | 21105.3 |
| domain of uncharacterised function (duf3783) | SAMEA1710551_03271 | Not Available | Positive | 3568846 - 3569268 | 15886.2 |
| d-isomer specific 2-hydroxyacid dehydrogenase | SAMEA1710551_03272 | Not Available | Positive | 3569370 - 3570308 | 35798.7 |
| dna ligase | SAMEA1710551_03273 | Not Available | Positive | 3570495 - 3572519 | 76408.3 |
| bifunctional enzyme, trna nucleotidyltransferase | SAMEA1710551_03274 | Not Available | Positive | 3572678 - 3574027 | 50060.4 |
| phosphoesterase | SAMEA1710551_03275 | Not Available | Positive | 3574027 - 3574497 | 17659.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
