Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA1710551_03256 | Not Available | Positive | 3558521 - 3558736 | 8507.29 |
| oxidoreductase, fe-s subunit | SAMEA1710551_03257 | Not Available | Positive | 3558773 - 3559324 | 20213.8 |
| iron hydrogenase | SAMEA1710551_03258 | Not Available | Positive | 3559349 - 3560725 | 50855.1 |
| oxidoreductase, fe-s subunit | SAMEA1710551_03259 | Not Available | Positive | 3560725 - 3561240 | 18782.9 |
| transporter, major facilitator superfamily (mfs) | SAMEA1710551_03260 | Not Available | Negative | 3561316 - 3562005 | 25421.9 |
| integrase family protein | SAMEA1710551_03261 | Not Available | Negative | 3562135 - 3563409 | 49428.5 |
| helix-turn-helix domain | SAMEA1710551_03262 | Not Available | Negative | 3563495 - 3563677 | 7144.6 |
| conjugative transposon replication initiation factor | SAMEA1710551_03263 | Not Available | Negative | 3563697 - 3564806 | 42721.7 |
| uncharacterised protein | SAMEA1710551_03264 | Not Available | Negative | 3564865 - 3565194 | 12451.2 |
| bifunctional hth-domain containing protein/aminotransferase | SAMEA1710551_03265 | Not Available | Positive | 3565443 - 3566126 | 26292.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
