Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate transporter | SAMEA1710551_03246 | Not Available | Negative | 3548600 - 3549166 | 20833.3 |
| chromate transporter | SAMEA1710551_03247 | Not Available | Negative | 3549163 - 3549726 | 20538.1 |
| lysr family transcriptional regulator | SAMEA1710551_03248 | Not Available | Positive | 3549846 - 3550721 | 32209.6 |
| membrane-associated nucleotidase | SAMEA1710551_03249 | Not Available | Negative | 3550869 - 3552032 | 44415.6 |
| domain of uncharacterised function (duf3786) | SAMEA1710551_03250 | Not Available | Negative | 3552408 - 3553037 | 24348.0 |
| two-component response regulator | SAMEA1710551_03251 | Not Available | Positive | 3553347 - 3554006 | 25207.7 |
| membrane protein | SAMEA1710551_03252 | Not Available | Positive | 3554217 - 3555275 | 40513.9 |
| formate dehydrogenase-h | SAMEA1710551_03253 | Not Available | Positive | 3555526 - 3555942 | 15539.8 |
| formate dehydrogenase-h | SAMEA1710551_03254 | Not Available | Positive | 3555991 - 3557670 | 62644.7 |
| formate dehydrogenase accessory protein | SAMEA1710551_03255 | Not Available | Positive | 3557719 - 3558552 | 31687.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
