Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein flgk (or hap1) | SAMEA1710551_03216 | Not Available | Negative | 3514419 - 3515729 | 48145.6 |
| flagellar biosynthesis protein | SAMEA1710551_03217 | Not Available | Negative | 3515747 - 3516163 | 16286.9 |
| negative regulator of flagellin synthesis | SAMEA1710551_03218 | Not Available | Negative | 3516168 - 3516443 | 10335.6 |
| flagellar motor switch protein flin | SAMEA1710551_03219 | Not Available | Negative | 3516595 - 3516909 | 11765.9 |
| protein of uncharacterised function (duf327) | SAMEA1710551_03220 | Not Available | Negative | 3516933 - 3517361 | 16473.8 |
| transglycosylase | SAMEA1710551_03221 | Not Available | Negative | 3517370 - 3518038 | 24752.4 |
| dtdp-glucose 4,6-dehydratase | SAMEA1710551_03222 | Not Available | Negative | 3518076 - 3519059 | 37584.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMEA1710551_03223 | Not Available | Negative | 3519097 - 3519654 | 21812.1 |
| glucose-1-phosphate thymidylyltransferase | SAMEA1710551_03224 | Not Available | Negative | 3519703 - 3520572 | 32221.1 |
| dtdp-4-dehydrorhamnose reductase | SAMEA1710551_03225 | Not Available | Negative | 3520681 - 3521553 | 33405.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
