Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein | SAMEA1710551_00226 | Not Available | Negative | 223375 - 223743 | 13821.7 |
| dna topoisomerase iii | SAMEA1710551_00227 | Not Available | Negative | 223740 - 225815 | 76386.4 |
| cell surface protein | SAMEA1710551_00228 | Not Available | Negative | 225812 - 226561 | 26601.7 |
| conjugative transposon protein | SAMEA1710551_00229 | Not Available | Negative | 226551 - 226817 | 9970.66 |
| toprim sub domain-containing protein | SAMEA1710551_00230 | Not Available | Negative | 227207 - 229126 | 71226.7 |
| endonuclease relaxase | SAMEA1710551_00231 | Not Available | Negative | 229123 - 230517 | 53302.1 |
| uncharacterised protein | SAMEA1710551_00232 | Not Available | Positive | 230699 - 231244 | 19872.1 |
| rrna (guanine-n1-) methyltransferase (mycinamicin-resistance protein) | SAMEA1710551_00233 | Not Available | Negative | 231304 - 232137 | 32188.8 |
| site-specific recombinase, resolvase family | SAMEA1710551_00234 | Not Available | Negative | 233037 - 234425 | 54229.5 |
| phage protein | SAMEA1710551_00235 | Not Available | Negative | 234422 - 234841 | 15800.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
