Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | SAMEA1710551_03196 | Not Available | Positive | 3496008 - 3496403 | 15314.6 |
| fad-dependent thymidylate synthase | SAMEA1710551_03197 | Not Available | Positive | 3496509 - 3497267 | 29016.1 |
| trna/rrna methyltransferase, trmh family, group3 | SAMEA1710551_03198 | Not Available | Positive | 3497280 - 3498017 | 26940.8 |
| ribonuclease | SAMEA1710551_03199 | Not Available | Positive | 3498020 - 3498547 | 20937.2 |
| rna polymerase factor sigma-70 | SAMEA1710551_03200 | Not Available | Positive | 3498612 - 3499259 | 24851.9 |
| uncharacterised protein | SAMEA1710551_03201 | Not Available | Negative | 3499499 - 3499597 | 3645.43 |
| ornithine cyclodeaminase | SAMEA1710551_03202 | Not Available | Negative | 3499691 - 3500635 | 36482.0 |
| carbamoyl-phosphate-synthetase | SAMEA1710551_03203 | Not Available | Negative | 3500655 - 3501887 | 46878.5 |
| uncharacterized protein involved in methicillin resistance | SAMEA1710551_03204 | Not Available | Negative | 3501979 - 3502974 | 39337.0 |
| glycosyl transferase group 2 family protein | SAMEA1710551_03205 | Not Available | Negative | 3502983 - 3505097 | 82316.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
