Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA1710551_03103 | Not Available | Negative | 3390741 - 3391526 | 28750.3 |
| kelch repeat type 1-containing protein | SAMEA1710551_03105 | Not Available | Positive | 3392524 - 3394704 | 81802.0 |
| uncharacterised protein | SAMEA1710551_03106 | Not Available | Positive | 3395118 - 3395921 | 30961.7 |
| atpase | SAMEA1710551_03107 | Not Available | Positive | 3395933 - 3397063 | 43352.9 |
| von willebrand factor a | SAMEA1710551_03108 | Not Available | Positive | 3397067 - 3398476 | 54917.6 |
| regulatory protein | SAMEA1710551_03109 | Not Available | Positive | 3398660 - 3399196 | 20792.5 |
| transporter, major facilitator superfamily (mfs) | SAMEA1710551_03110 | Not Available | Positive | 3401058 - 3402413 | 49703.8 |
| diaminopimelate epimerase, phzf family | SAMEA1710551_03111 | Not Available | Negative | 3402640 - 3403521 | 32528.8 |
| trmb family transcriptional regulator | SAMEA1710551_03112 | Not Available | Negative | 3403508 - 3404260 | 28623.9 |
| thioredoxin | SAMEA1710551_03113 | Not Available | Positive | 3404512 - 3404829 | 12021.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
