Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit b | SAMEA1710551_03052 | Not Available | Positive | 3326406 - 3328376 | 75637.1 |
| excinuclease abc subunit a | SAMEA1710551_03053 | Not Available | Positive | 3328395 - 3331220 | 104976.0 |
| excinuclease abc subunit c | SAMEA1710551_03054 | Not Available | Positive | 3331483 - 3333300 | 70318.5 |
| hpr kinase/phosphorylase | SAMEA1710551_03055 | Not Available | Positive | 3333300 - 3334229 | 35511.2 |
| dna mismatch repair atpase muts | SAMEA1710551_03056 | Not Available | Positive | 3334443 - 3336239 | 68011.7 |
| iron-only hydrogenase, catalytic subunit hymc-like | SAMEA1710551_03057 | Not Available | Negative | 3336379 - 3338160 | 64870.8 |
| iron-only hydrogenase,electron-transferring subunit hymb-like | SAMEA1710551_03058 | Not Available | Negative | 3338183 - 3340069 | 67908.6 |
| iron-only hydrogenase,electron-transferring subunit hyma-like | SAMEA1710551_03059 | Not Available | Negative | 3340086 - 3340583 | 18136.1 |
| cardiolipin synthetase (cardiolipin synthase) (cl synthase) | SAMEA1710551_03060 | Not Available | Negative | 3340901 - 3342382 | 56905.8 |
| formate/nitrite transporter | SAMEA1710551_03061 | Not Available | Positive | 3342701 - 3343471 | 26880.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
