Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | SAMEA1710551_00206 | Not Available | Negative | 204419 - 204892 | 18757.3 |
| uncharacterised protein | SAMEA1710551_00207 | Not Available | Negative | 205256 - 205687 | 16607.9 |
| sporulation initiation factor spo0a c terminal | SAMEA1710551_00208 | Not Available | Negative | 205684 - 205902 | 8399.87 |
| hth-type transcriptional regulator type 3 | SAMEA1710551_00209 | Not Available | Negative | 206044 - 206358 | 11194.8 |
| uncharacterised protein | SAMEA1710551_00210 | Not Available | Negative | 206520 - 206885 | 14694.7 |
| phage transcriptional regulator, arpu family | SAMEA1710551_00211 | Not Available | Negative | 206895 - 207467 | 22460.3 |
| uncharacterised protein | SAMEA1710551_00212 | Not Available | Negative | 207698 - 207937 | 9228.41 |
| nucleotidyltransferase/dna polymerase involved in dna repair | SAMEA1710551_00213 | Not Available | Negative | 208177 - 209424 | 47075.5 |
| uvrd/rep helicase | SAMEA1710551_00214 | Not Available | Positive | 209617 - 210357 | 27342.6 |
| uncharacterised protein | SAMEA1710551_00215 | Not Available | Negative | 210782 - 211591 | 31751.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
