Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iv | SAMEA1710551_03001 | Not Available | Negative | 3265540 - 3266376 | 31107.5 |
| arsr family transcriptional regulator | SAMEA1710551_03002 | Not Available | Negative | 3266859 - 3267422 | 21628.0 |
| glutaminase | SAMEA1710551_03003 | Not Available | Negative | 3267520 - 3268449 | 33950.1 |
| uridine kinase | SAMEA1710551_03004 | Not Available | Negative | 3269007 - 3270674 | 64533.2 |
| sugar isomerase / endonuclease | SAMEA1710551_03005 | Not Available | Negative | 3270748 - 3271503 | 28970.5 |
| signal peptidase type i | SAMEA1710551_03006 | Not Available | Negative | 3271513 - 3272049 | 20460.1 |
| signal peptidase type i | SAMEA1710551_03007 | Not Available | Negative | 3272215 - 3272751 | 20151.6 |
| rna methyltransferase | SAMEA1710551_03008 | Not Available | Negative | 3272851 - 3274161 | 50471.6 |
| spore-cortex-lytic protein sleb | SAMEA1710551_03009 | Not Available | Negative | 3274240 - 3274956 | 27791.5 |
| spore cortex-lytic enzyme pre-pro-form | SAMEA1710551_03010 | Not Available | Positive | 3275193 - 3276464 | 47385.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
