Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | SAMEA1710551_02942 | Not Available | Negative | 3225555 - 3225872 | 11713.4 |
| two-component sensor histidine kinase | SAMEA1710551_02943 | Not Available | Negative | 3226028 - 3227260 | 47600.8 |
| two-component response regulator | SAMEA1710551_02944 | Not Available | Negative | 3227250 - 3227921 | 26242.9 |
| lipoprotein | SAMEA1710551_02945 | Not Available | Negative | 3227937 - 3228773 | 31509.5 |
| transcriptional regulator | SAMEA1710551_02946 | Not Available | Negative | 3228799 - 3229473 | 26685.9 |
| dna alkylation repair enzyme | SAMEA1710551_02947 | Not Available | Negative | 3229487 - 3230215 | 29499.9 |
| radical sam superfamily protein | SAMEA1710551_02948 | Not Available | Negative | 3230342 - 3231031 | 26951.2 |
| membrane protein | SAMEA1710551_02949 | Not Available | Negative | 3231039 - 3231602 | 19748.1 |
| nucleoside hydrolase, iunh family | SAMEA1710551_02950 | Not Available | Negative | 3231604 - 3232572 | 36042.7 |
| tetr family transcriptional regulator | SAMEA1710551_02952 | Not Available | Positive | 3233064 - 3233690 | 23814.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
