Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase subunit alpha | SAMEA1710551_02932 | Not Available | Positive | 3216336 - 3217001 | 24020.0 |
| riboflavin biosynthesis 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase-2 | SAMEA1710551_02933 | Not Available | Positive | 3217024 - 3218217 | 44738.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMEA1710551_02934 | Not Available | Positive | 3218323 - 3218784 | 16692.4 |
| uncharacterised protein | SAMEA1710551_02935 | Not Available | Positive | 3219186 - 3219614 | 17466.2 |
| sodium:alanine symporter | SAMEA1710551_02936 | Not Available | Negative | 3219824 - 3221275 | 52152.5 |
| symporter protein | SAMEA1710551_02937 | Not Available | Positive | 3221744 - 3223009 | 45361.9 |
| uncharacterised protein | SAMEA1710551_02938 | Not Available | Positive | 3223048 - 3223503 | 17548.8 |
| dinitrogenase iron-molybdenum cofactor | SAMEA1710551_02939 | Not Available | Negative | 3223647 - 3224018 | 12968.5 |
| arsr family transcriptional regulator | SAMEA1710551_02940 | Not Available | Negative | 3224021 - 3224389 | 13944.1 |
| thioredoxin-disulfide reductase | SAMEA1710551_02941 | Not Available | Negative | 3224660 - 3225538 | 32285.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
