Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rela/spot domain-containing protein | SAMEA1710551_02920 | Not Available | Negative | 3203472 - 3204839 | 54826.3 |
| c4-dicarboxylate anaerobic carrier | SAMEA1710551_02921 | Not Available | Negative | 3205355 - 3206749 | 49329.4 |
| thiamine-phosphate pyrophosphorylase thie2 | SAMEA1710551_02922 | Not Available | Negative | 3206935 - 3207624 | 26805.9 |
| thiamine biosynthesis protein thih | SAMEA1710551_02923 | Not Available | Negative | 3207625 - 3208728 | 42294.7 |
| thiazole synthase | SAMEA1710551_02924 | Not Available | Negative | 3208745 - 3209515 | 27546.6 |
| thiamine biosynthesis protein | SAMEA1710551_02925 | Not Available | Negative | 3209578 - 3210387 | 30101.8 |
| thiamine biosynthesis protein this | SAMEA1710551_02926 | Not Available | Negative | 3210374 - 3210568 | 7349.75 |
| thiamine biosynthesis protein thic | SAMEA1710551_02927 | Not Available | Negative | 3210622 - 3211923 | 48439.6 |
| atp-dependent dna helicase | SAMEA1710551_02929 | Not Available | Negative | 3212265 - 3214748 | 94850.0 |
| riboflavin biosynthesis bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductase | SAMEA1710551_02931 | Not Available | Positive | 3215190 - 3216302 | 41365.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
