Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase tn916-like, ctn1-orf1 | SAMEA1710551_02888 | Not Available | Positive | 3174000 - 3175190 | 45988.4 |
| two-component sensor histidine kinase | SAMEA1710551_02889 | Not Available | Negative | 3175464 - 3176624 | 44312.9 |
| two-component response regulator | SAMEA1710551_02890 | Not Available | Negative | 3176612 - 3177286 | 26135.4 |
| carbon-nitrogen hydrolase | SAMEA1710551_02891 | Not Available | Negative | 3178079 - 3178906 | 31059.5 |
| small multidrug resistance suge-like protein | SAMEA1710551_02893 | Not Available | Positive | 3179288 - 3179608 | 11479.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | SAMEA1710551_02894 | Not Available | Negative | 3179738 - 3180418 | 25206.2 |
| sugar-phosphate dehydrogenase | SAMEA1710551_02895 | Not Available | Positive | 3180814 - 3181866 | 38519.9 |
| pts system transporter subunit iia | SAMEA1710551_02896 | Not Available | Positive | 3181921 - 3182328 | 14831.2 |
| pts system mannose/fructose/sorbose transporter subunit iib | SAMEA1710551_02897 | Not Available | Positive | 3182357 - 3182830 | 17224.2 |
| pts system mannose/fructose/sorbose transporter subunit iic | SAMEA1710551_02898 | Not Available | Positive | 3182887 - 3183645 | 27056.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
