Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillinase transcriptional regulator | SAMEA1710551_02838 | Not Available | Negative | 3126235 - 3126621 | 14958.0 |
| uracil dna glycosylase superfamily | SAMEA1710551_02839 | Not Available | Negative | 3126992 - 3127618 | 24077.4 |
| uncharacterised protein | SAMEA1710551_02840 | Not Available | Negative | 3127761 - 3128018 | 10258.2 |
| uncharacterised protein | SAMEA1710551_02841 | Not Available | Positive | 3128419 - 3128541 | 4840.91 |
| lantibiotic abc transporter atp-binding protein | SAMEA1710551_02842 | Not Available | Positive | 3128796 - 3129500 | 25948.8 |
| abc transporter lantibiotic/multidrug-family permease | SAMEA1710551_02843 | Not Available | Positive | 3129497 - 3130267 | 28319.8 |
| abc transporter lantibiotic/multidrug-family permease | SAMEA1710551_02844 | Not Available | Positive | 3130264 - 3131043 | 28280.9 |
| two-component response regulator | SAMEA1710551_02845 | Not Available | Positive | 3131095 - 3131787 | 26460.1 |
| two-component sensor histidine kinase | SAMEA1710551_02846 | Not Available | Positive | 3131806 - 3133230 | 53966.2 |
| abc transporter permease | SAMEA1710551_02847 | Not Available | Negative | 3133471 - 3135939 | 91832.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
