Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transport protein b | SAMEA1710551_02686 | Not Available | Positive | 2966487 - 2968643 | 78183.4 |
| virus attachment protein p12 family | SAMEA1710551_02687 | Not Available | Positive | 2968669 - 2968821 | 5172.6 |
| abc transporter atp-binding protein | SAMEA1710551_02688 | Not Available | Positive | 2969194 - 2969928 | 28705.9 |
| coenzyme pqq synthesis protein d (pqqd) | SAMEA1710551_02689 | Not Available | Negative | 2970177 - 2970524 | 13705.5 |
| oligopeptide transporter | SAMEA1710551_02690 | Not Available | Negative | 2970511 - 2972442 | 66554.7 |
| synthetase | SAMEA1710551_02691 | Not Available | Negative | 2972853 - 2975042 | 84825.6 |
| glycerophosphoryl diester phosphodiesterase | SAMEA1710551_02692 | Not Available | Positive | 2975376 - 2976107 | 27857.8 |
| isochorismatase | SAMEA1710551_02693 | Not Available | Positive | 2976187 - 2976822 | 24038.9 |
| protein of uncharacterised function (duf3867) | SAMEA1710551_02694 | Not Available | Negative | 2977074 - 2977667 | 23415.9 |
| muramoyltetrapeptide carboxypeptidase,s66 family | SAMEA1710551_02695 | Not Available | Negative | 2977738 - 2978601 | 32456.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
