Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SAMEA1710551_02526 | Not Available | Positive | 2758612 - 2759469 | 32755.8 |
| abc transporter permease | SAMEA1710551_02527 | Not Available | Positive | 2759472 - 2760110 | 24520.6 |
| beta-lactamase-like protein | SAMEA1710551_02528 | Not Available | Positive | 2761066 - 2761800 | 27466.1 |
| chloride ion channel protein | SAMEA1710551_02529 | Not Available | Positive | 2762832 - 2764088 | 45526.9 |
| na(+)/h(+) antiporter | SAMEA1710551_02530 | Not Available | Positive | 2764312 - 2764512 | 7057.04 |
| beta-lactams repressor | SAMEA1710551_02531 | Not Available | Positive | 2764703 - 2765083 | 15177.6 |
| alternative rna polymerase sigma factors | SAMEA1710551_02532 | Not Available | Positive | 2766117 - 2766671 | 22107.9 |
| toxin b | SAMEA1710551_02533 | Not Available | Positive | 2766989 - 2774089 | 269732.0 |
| holin-like pore-forming protein | SAMEA1710551_02534 | Not Available | Positive | 2774289 - 2774711 | 15866.1 |
| uncharacterised protein | SAMEA1710551_02535 | Not Available | Positive | 2774820 - 2774951 | 5083.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
