Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | SAMEA1710551_02506 | Not Available | Positive | 2738295 - 2738525 | 8101.09 |
| membrane protein | SAMEA1710551_02507 | Not Available | Positive | 2738518 - 2739099 | 22746.6 |
| crp family transcriptional regulator | SAMEA1710551_02508 | Not Available | Negative | 2739673 - 2740350 | 25310.6 |
| drug/sodium antiporter, mate family | SAMEA1710551_02509 | Not Available | Negative | 2740625 - 2740753 | 4816.09 |
| transcriptional regulator | SAMEA1710551_02510 | Not Available | Positive | 2740881 - 2741402 | 19696.9 |
| hydrolase | SAMEA1710551_02511 | Not Available | Positive | 2741785 - 2742582 | 30809.8 |
| radical sam superfamily protein | SAMEA1710551_02512 | Not Available | Positive | 2742962 - 2743852 | 34227.7 |
| acetyltransferase | SAMEA1710551_02513 | Not Available | Positive | 2744516 - 2744959 | 17190.8 |
| uncharacterised protein | SAMEA1710551_02514 | Not Available | Positive | 2745131 - 2745301 | 6500.96 |
| pd-(d/e)xk nuclease family transposase | SAMEA1710551_02515 | Not Available | Positive | 2745674 - 2746771 | 42944.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
