Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | SAMEA1710551_02496 | Not Available | Negative | 2728120 - 2728701 | 22562.4 |
| merr family transcriptional regulator | SAMEA1710551_02497 | Not Available | Negative | 2728824 - 2729648 | 32325.8 |
| membrane protein | SAMEA1710551_02498 | Not Available | Negative | 2729814 - 2730707 | 34422.7 |
| lytr family transcriptional regulator | SAMEA1710551_02499 | Not Available | Negative | 2730961 - 2731398 | 16816.7 |
| protein of uncharacterised function (duf2922) | SAMEA1710551_02500 | Not Available | Negative | 2731809 - 2732048 | 8792.71 |
| protein of uncharacterised function (duf1659) | SAMEA1710551_02501 | Not Available | Negative | 2732373 - 2732594 | 7811.37 |
| transcriptional regulator, activator mor | SAMEA1710551_02502 | Not Available | Positive | 2733173 - 2733430 | 9934.14 |
| phage-related regulatory protein | SAMEA1710551_02503 | Not Available | Positive | 2733878 - 2735116 | 48218.7 |
| replicative helicase dnab-like | SAMEA1710551_02504 | Not Available | Positive | 2735585 - 2736886 | 49627.0 |
| transcriptional regulator, activator mor | SAMEA1710551_02505 | Not Available | Positive | 2736962 - 2737237 | 10802.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
