Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine decarboxylase | SAMEA1710551_02445 | Not Available | Negative | 2661697 - 2662110 | 15659.6 |
| arginine decarboxylase | SAMEA1710551_02446 | Not Available | Negative | 2662197 - 2663672 | 54431.4 |
| gntr family transcriptional regulator | SAMEA1710551_02447 | Not Available | Negative | 2664325 - 2664963 | 24615.4 |
| alpha-amylase | SAMEA1710551_02448 | Not Available | Negative | 2665209 - 2667074 | 72756.9 |
| glycogen phosphorylase | SAMEA1710551_02449 | Not Available | Negative | 2667079 - 2669499 | 93006.5 |
| glycogen synthase (starch | SAMEA1710551_02450 | Not Available | Negative | 2669513 - 2670955 | 55499.5 |
| glycogen biosynthesis protein | SAMEA1710551_02451 | Not Available | Negative | 2670984 - 2672114 | 42806.1 |
| glucose-1-phosphate adenylyltransferase | SAMEA1710551_02452 | Not Available | Negative | 2672116 - 2673276 | 43414.2 |
| protein modulating protease activity | SAMEA1710551_02453 | Not Available | Negative | 2674045 - 2675088 | 38410.2 |
| protease | SAMEA1710551_02454 | Not Available | Negative | 2675109 - 2675555 | 16209.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
