Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | SAMEA1710551_02424 | Not Available | Negative | 2637683 - 2638402 | 27129.5 |
| 30s ribosomal protein s1 | SAMEA1710551_02425 | Not Available | Negative | 2638520 - 2639794 | 48501.0 |
| drug/sodium antiporter, mate family | SAMEA1710551_02426 | Not Available | Negative | 2639994 - 2641361 | 49546.9 |
| membrane protein | SAMEA1710551_02427 | Not Available | Negative | 2641611 - 2642048 | 15796.5 |
| hydrolase, had superfamily, subfamily ib | SAMEA1710551_02428 | Not Available | Negative | 2642080 - 2642709 | 24448.1 |
| phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase | SAMEA1710551_02429 | Not Available | Negative | 2642743 - 2643630 | 33685.2 |
| membrane protein | SAMEA1710551_02430 | Not Available | Negative | 2643659 - 2644882 | 46394.7 |
| aldo/keto reductase | SAMEA1710551_02431 | Not Available | Negative | 2645281 - 2646423 | 43125.6 |
| cation efflux protein | SAMEA1710551_02432 | Not Available | Negative | 2646564 - 2647430 | 32450.1 |
| abc transporter glycine betaine/carnitine/choline permease | SAMEA1710551_02433 | Not Available | Negative | 2647708 - 2649255 | 56517.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
