Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SAMEA1710551_02393 | Not Available | Positive | 2603656 - 2604075 | 16461.1 |
| glucosamine-6-phosphate deaminase | SAMEA1710551_02394 | Not Available | Negative | 2604207 - 2604956 | 27619.1 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMEA1710551_02395 | Not Available | Negative | 2605055 - 2606188 | 41635.1 |
| gntr family transcriptional regulator | SAMEA1710551_02396 | Not Available | Negative | 2606198 - 2606932 | 27952.9 |
| s1 rna binding domain | SAMEA1710551_02397 | Not Available | Positive | 2607228 - 2608070 | 31791.1 |
| abc transporter permease | SAMEA1710551_02398 | Not Available | Negative | 2608251 - 2610581 | 87191.6 |
| abc transporter atpase | SAMEA1710551_02399 | Not Available | Negative | 2610578 - 2611261 | 25045.3 |
| sensor protein | SAMEA1710551_02400 | Not Available | Negative | 2611333 - 2612574 | 47432.7 |
| signal transduction response regulator | SAMEA1710551_02401 | Not Available | Negative | 2612585 - 2613268 | 26177.8 |
| transcription activator | SAMEA1710551_02402 | Not Available | Negative | 2613789 - 2614052 | 10140.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
