Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spore coat protein | SAMEA1710551_02383 | Not Available | Negative | 2589675 - 2591540 | 68899.1 |
| membrane protein | SAMEA1710551_02384 | Not Available | Negative | 2591557 - 2592231 | 24539.3 |
| vtc domain-containing protein | SAMEA1710551_02385 | Not Available | Negative | 2592330 - 2593019 | 26883.7 |
| abc transporter multidrug-family atp-binding protein/permease | SAMEA1710551_02386 | Not Available | Negative | 2593350 - 2595212 | 68784.9 |
| abc transporter multidrug-family atp-binding protein/permease | SAMEA1710551_02387 | Not Available | Negative | 2595250 - 2596977 | 64114.2 |
| merr family transcriptional regulator | SAMEA1710551_02388 | Not Available | Positive | 2597050 - 2597880 | 32488.8 |
| membrane-associated caax amino terminal protease | SAMEA1710551_02389 | Not Available | Positive | 2597897 - 2598874 | 37501.4 |
| two-component sensor histidine kinase | SAMEA1710551_02390 | Not Available | Negative | 2599089 - 2600702 | 62481.2 |
| two-component system sensor histidine kinase | SAMEA1710551_02391 | Not Available | Negative | 2600907 - 2602394 | 56856.3 |
| two-component response regulator | SAMEA1710551_02392 | Not Available | Negative | 2602396 - 2603100 | 27239.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
