Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit b | SAMEA1710551_02363 | Not Available | Positive | 2567552 - 2569453 | 71125.0 |
| dna gyrase subunit a | SAMEA1710551_02364 | Not Available | Positive | 2569471 - 2571897 | 91098.3 |
| gas vesicle protein | SAMEA1710551_02365 | Not Available | Positive | 2571966 - 2572262 | 11215.3 |
| uncharacterised protein | SAMEA1710551_02366 | Not Available | Positive | 2572262 - 2572522 | 9589.84 |
| anti-sigma-b factor antagonist | SAMEA1710551_02367 | Not Available | Positive | 2572534 - 2572851 | 11913.6 |
| serine-protein kinase rsbw | SAMEA1710551_02368 | Not Available | Positive | 2572855 - 2573262 | 14886.8 |
| rna polymerase sigma-b factor (sigma-37) | SAMEA1710551_02369 | Not Available | Positive | 2573262 - 2574035 | 30033.9 |
| mannosyl-glycoprotein endo-beta-n-acetylglucosamidase | SAMEA1710551_02370 | Not Available | Negative | 2574346 - 2575320 | 37317.9 |
| udp-n-acetylglucosamine 2-epimerase | SAMEA1710551_02371 | Not Available | Negative | 2575428 - 2576552 | 42366.5 |
| putative enzyme with tim-barrel fold | SAMEA1710551_02372 | Not Available | Negative | 2576609 - 2577691 | 42350.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
