Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna modification gtpase trme | SAMEA1710551_02353 | Not Available | Negative | 2559080 - 2560459 | 51250.6 |
| spoiiij-associated rna/ssdna-binding protein jag | SAMEA1710551_02354 | Not Available | Negative | 2560571 - 2561200 | 23953.0 |
| sporulation membrane protein spoiiij | SAMEA1710551_02355 | Not Available | Negative | 2561169 - 2561876 | 26548.3 |
| protein yidd | SAMEA1710551_02356 | Not Available | Negative | 2561908 - 2562159 | 9941.47 |
| ribonuclease p | SAMEA1710551_02357 | Not Available | Negative | 2562191 - 2562535 | 13304.4 |
| 50s ribosomal protein l34 | SAMEA1710551_02358 | Not Available | Negative | 2562613 - 2562750 | 5565.89 |
| chromosomal replication initiation protein | SAMEA1710551_02359 | Not Available | Positive | 2563409 - 2564728 | 50257.3 |
| dna polymerase iii subunit beta | SAMEA1710551_02360 | Not Available | Positive | 2564970 - 2566076 | 41600.3 |
| rna-binding mediating protein | SAMEA1710551_02361 | Not Available | Positive | 2566213 - 2566419 | 7602.33 |
| dna replication and repair protein recf | SAMEA1710551_02362 | Not Available | Positive | 2566436 - 2567551 | 42922.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
