Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reductive dehalogenase | SAMEA1710551_00146 | Not Available | Negative | 142274 - 143338 | 40312.1 |
| two-component response regulator | SAMEA1710551_00147 | Not Available | Positive | 143600 - 144271 | 25779.1 |
| two-component sensor histidine kinase | SAMEA1710551_00148 | Not Available | Positive | 144273 - 145181 | 34685.6 |
| abc transporter atp-binding protein | SAMEA1710551_00149 | Not Available | Positive | 145256 - 145942 | 24903.3 |
| abc transporter permease | SAMEA1710551_00150 | Not Available | Positive | 145939 - 148494 | 97237.7 |
| f420-0 gamma-glutamyl ligase | SAMEA1710551_00151 | Not Available | Negative | 148699 - 149898 | 44102.3 |
| lysr family transcriptional regulator | SAMEA1710551_00152 | Not Available | Positive | 150017 - 150904 | 33742.2 |
| acetyltransferase | SAMEA1710551_00153 | Not Available | Positive | 151094 - 151651 | 21505.0 |
| membrane protein | SAMEA1710551_00154 | Not Available | Negative | 151892 - 152752 | 30804.8 |
| two-component sensor histidine kinase | SAMEA1710551_00155 | Not Available | Positive | 153251 - 154648 | 53403.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
