Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system fructose/mannitol-family transporter subunit iib | SAMEA1710551_02303 | Not Available | Negative | 2513153 - 2513440 | 10566.9 |
| pts operon transcription antiterminator | SAMEA1710551_02304 | Not Available | Negative | 2513455 - 2515536 | 80216.3 |
| isochorismatase | SAMEA1710551_02305 | Not Available | Negative | 2516025 - 2516546 | 20211.0 |
| alpha-glucosidase, family 31 of glycosyl hydrolase | SAMEA1710551_02306 | Not Available | Negative | 2517172 - 2518020 | 33325.5 |
| membrane protein | SAMEA1710551_02307 | Not Available | Negative | 2518058 - 2518570 | 18885.9 |
| uncharacterised protein | SAMEA1710551_02308 | Not Available | Negative | 2518563 - 2518787 | 8482.63 |
| nadph-dependent fmn reductase | SAMEA1710551_02309 | Not Available | Negative | 2518840 - 2519793 | 34852.1 |
| uncharacterized conserved protein | SAMEA1710551_02310 | Not Available | Negative | 2519821 - 2521209 | 52141.4 |
| lysr family transcriptional regulator | SAMEA1710551_02311 | Not Available | Positive | 2521482 - 2522363 | 33435.2 |
| ribokinase family sugar kinase | SAMEA1710551_02312 | Not Available | Negative | 2522551 - 2523543 | 37447.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
