Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline reductase prde | SAMEA1710551_02200 | Not Available | Negative | 2398042 - 2398509 | 16981.1 |
| proline reductase prdd | SAMEA1710551_02201 | Not Available | Negative | 2398524 - 2399282 | 28251.2 |
| proline reductase | SAMEA1710551_02202 | Not Available | Negative | 2399362 - 2399607 | 8696.74 |
| proline reductase | SAMEA1710551_02203 | Not Available | Negative | 2399635 - 2400087 | 15990.2 |
| uncharacterised protein | SAMEA1710551_02204 | Not Available | Negative | 2400125 - 2400409 | 10946.2 |
| d-proline reductase proprotein prda | SAMEA1710551_02205 | Not Available | Negative | 2400490 - 2402370 | 67623.0 |
| sigma-54-dependent transcriptional activator | SAMEA1710551_02206 | Not Available | Negative | 2402799 - 2404559 | 67245.8 |
| surface protein | SAMEA1710551_02207 | Not Available | Negative | 2404966 - 2407044 | 76248.3 |
| electron transfer protein | SAMEA1710551_02209 | Not Available | Negative | 2408099 - 2409412 | 46836.5 |
| polysaccharide deacetylase | SAMEA1710551_02210 | Not Available | Negative | 2409802 - 2410566 | 29075.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
