Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter multidrug-family atp-binding protein | SAMEA1710551_02159 | Not Available | Negative | 2356602 - 2357447 | 31972.7 |
| two-component sensor histidine kinase | SAMEA1710551_02160 | Not Available | Negative | 2357895 - 2359025 | 43281.5 |
| two-component response regulator | SAMEA1710551_02161 | Not Available | Negative | 2359022 - 2359693 | 25621.5 |
| membrane protein | SAMEA1710551_02162 | Not Available | Negative | 2359895 - 2360545 | 24840.4 |
| uncharacterised protein | SAMEA1710551_02163 | Not Available | Negative | 2360602 - 2360832 | 9349.73 |
| nitroreductase | SAMEA1710551_02164 | Not Available | Positive | 2361357 - 2361950 | 22434.9 |
| membrane protein | SAMEA1710551_02165 | Not Available | Positive | 2362006 - 2362317 | 11847.0 |
| na+ driven multidrug efflux pump | SAMEA1710551_02166 | Not Available | Negative | 2362677 - 2364080 | 51008.8 |
| marr family transcriptional regulator | SAMEA1710551_02167 | Not Available | Negative | 2364064 - 2364525 | 17941.6 |
| padr family transcriptional regulator | SAMEA1710551_02168 | Not Available | Positive | 2364871 - 2365386 | 20356.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
