Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein | SAMEA1710551_00127 | Not Available | Positive | 121893 - 123857 | 74640.6 |
| trna delta(2)-isopentenylpyrophosphate transferase | SAMEA1710551_00128 | Not Available | Positive | 123878 - 124813 | 36515.2 |
| rna-binding protein hfq | SAMEA1710551_00129 | Not Available | Positive | 124927 - 125184 | 9789.79 |
| pyridoxal phosphate-dependent transferase | SAMEA1710551_00130 | Not Available | Positive | 125311 - 126591 | 47636.2 |
| peptidase, m20a family | SAMEA1710551_00131 | Not Available | Positive | 126660 - 128006 | 49797.3 |
| adp ribosyltransferase | SAMEA1710551_00132 | Not Available | Positive | 128139 - 129221 | 42206.0 |
| cyclase | SAMEA1710551_00133 | Not Available | Positive | 129308 - 129940 | 24234.9 |
| oligonucleotide binding regulator | SAMEA1710551_00134 | Not Available | Positive | 129986 - 130525 | 20701.8 |
| membrane protein | SAMEA1710551_00135 | Not Available | Positive | 130574 - 131260 | 23401.4 |
| uncharacterised protein | SAMEA1710551_00136 | Not Available | Positive | 131442 - 132317 | 34125.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
