Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator | SAMEA1710551_02067 | Not Available | Positive | 2249265 - 2249603 | 12675.7 |
| hth-type transcriptional regulator | SAMEA1710551_02068 | Not Available | Positive | 2249625 - 2249942 | 12072.8 |
| uncharacterised protein | SAMEA1710551_02069 | Not Available | Positive | 2250092 - 2250448 | 14000.2 |
| uncharacterised protein | SAMEA1710551_02070 | Not Available | Positive | 2250485 - 2250772 | 11833.4 |
| 3-dehydroquinate dehydratase | SAMEA1710551_02071 | Not Available | Negative | 2251113 - 2251880 | 28703.2 |
| streptogramin a acetyltransferase (virginiamycin acetyltransferase d) (vat(d)) | SAMEA1710551_02072 | Not Available | Positive | 2252641 - 2253273 | 24072.7 |
| radical sam protein | SAMEA1710551_02073 | Not Available | Negative | 2253646 - 2254515 | 33240.8 |
| lysophospholipase | SAMEA1710551_02074 | Not Available | Negative | 2254611 - 2255468 | 31996.9 |
| membrane protein | SAMEA1710551_02075 | Not Available | Negative | 2255683 - 2257701 | 77168.6 |
| formate/nitrite transporter | SAMEA1710551_02076 | Not Available | Negative | 2257973 - 2258749 | 27247.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
