Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix family hydrolase | SAMEA1710551_00115 | Not Available | Negative | 112102 - 112713 | 23606.3 |
| epimerase | SAMEA1710551_00116 | Not Available | Negative | 112938 - 113858 | 34156.3 |
| hxlr family transcriptional regulator | SAMEA1710551_00117 | Not Available | Positive | 114114 - 114470 | 14016.1 |
| uncharacterised protein | SAMEA1710551_00118 | Not Available | Negative | 114585 - 114761 | 6890.3 |
| uncharacterised protein | SAMEA1710551_00120 | Not Available | Positive | 115425 - 115598 | 6878.09 |
| uncharacterized conserved protein | SAMEA1710551_00122 | Not Available | Positive | 116103 - 116393 | 10753.2 |
| abc transporter permease | SAMEA1710551_00123 | Not Available | Positive | 116368 - 117138 | 28863.9 |
| abc transporter extracellular solute-binding protein | SAMEA1710551_00124 | Not Available | Positive | 117160 - 118173 | 37640.4 |
| abc transporter atp-binding protein | SAMEA1710551_00125 | Not Available | Positive | 118142 - 118876 | 28036.3 |
| dna mismatch repair protein muts | SAMEA1710551_00126 | Not Available | Positive | 119039 - 121882 | 108592.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
