Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sirohydrochlorin cobaltochelatase | SAMEA1710551_02037 | Not Available | Positive | 2211459 - 2212937 | 55729.7 |
| porphobilinogen deaminase | SAMEA1710551_02038 | Not Available | Positive | 2212967 - 2213872 | 33525.9 |
| bifunctional uroporphyrinogen-iii methyltransferase/uroporphyrinogen-iii synthase | Not Available | Not Available | Positive | 2213862 - 2215361 | 55619.3 |
| delta-aminolevulinic acid dehydratase (porphobilinogen synthase) | SAMEA1710551_02040 | Not Available | Positive | 2215378 - 2216349 | 36213.6 |
| precorrin-2 dehydrogenase | SAMEA1710551_02041 | Not Available | Positive | 2216492 - 2217070 | 22229.1 |
| cyclomaltodextrinase (maltogenic alpha-amylase) (cyclomaltodextrin dextrin-hydrolase (decyclizing)) | SAMEA1710551_02042 | Not Available | Negative | 2217913 - 2219796 | 73638.0 |
| phosphoesterase | SAMEA1710551_02043 | Not Available | Negative | 2220054 - 2220875 | 32044.7 |
| membrane protein | SAMEA1710551_02044 | Not Available | Negative | 2221065 - 2221418 | 13538.4 |
| cell surface protein | SAMEA1710551_02045 | Not Available | Negative | 2221460 - 2222902 | 51292.9 |
| rok protein | SAMEA1710551_02046 | Not Available | Positive | 2223560 - 2224771 | 44185.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
