Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA1710551_00103 | Not Available | Negative | 102823 - 103059 | 9204.74 |
| uncharacterised protein | SAMEA1710551_00104 | Not Available | Negative | 103136 - 103246 | 4246.2 |
| helix-turn-helix protein | SAMEA1710551_00105 | Not Available | Positive | 103402 - 103623 | 8639.52 |
| uncharacterised protein | SAMEA1710551_00106 | Not Available | Positive | 103643 - 103948 | 11931.4 |
| sh3 domain protein | SAMEA1710551_00108 | Not Available | Positive | 104474 - 104959 | 18709.6 |
| membrane protein | SAMEA1710551_00109 | Not Available | Positive | 105174 - 105704 | 20920.7 |
| tryptophan transport protein | SAMEA1710551_00111 | Not Available | Positive | 106548 - 107099 | 19632.3 |
| cell wall binding protein | SAMEA1710551_00112 | Not Available | Positive | 107928 - 109364 | 51837.0 |
| (dimethylallyl)adenosine trna methylthiotransferase miab (trna-i(6)a37 methylthiotransferase) | SAMEA1710551_00113 | Not Available | Positive | 109615 - 111051 | 55378.7 |
| membrane protein | SAMEA1710551_00114 | Not Available | Negative | 111459 - 111797 | 12737.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
