Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA1710551_01935 | Not Available | Positive | 2114942 - 2115739 | 31524.8 |
| udp-n-acetylmuramate--l-alanine ligase | SAMEA1710551_01936 | Not Available | Negative | 2115794 - 2117146 | 50241.7 |
| pur operon repressor | SAMEA1710551_01937 | Not Available | Positive | 2117365 - 2118243 | 32494.4 |
| regulator required for spore cortex synthesis | SAMEA1710551_01938 | Not Available | Positive | 2118399 - 2118677 | 10461.8 |
| bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase | SAMEA1710551_01939 | Not Available | Positive | 2118890 - 2120269 | 50322.5 |
| ribose-phosphate pyrophosphokinase | SAMEA1710551_01940 | Not Available | Positive | 2120363 - 2121313 | 34229.6 |
| pilin | SAMEA1710551_01942 | Not Available | Positive | 2122398 - 2122919 | 18589.6 |
| type iv pilus assembly protein | SAMEA1710551_01943 | Not Available | Positive | 2123070 - 2124746 | 62859.4 |
| type iv pilus secretion protein | SAMEA1710551_01944 | Not Available | Positive | 2124758 - 2125966 | 45320.4 |
| membrane protein | SAMEA1710551_01945 | Not Available | Positive | 2125981 - 2127693 | 64938.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
