Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism protein phnm | SAMEA1710551_01925 | Not Available | Positive | 2105673 - 2105804 | 4762.72 |
| polymerase/histidinol phosphatase-like | SAMEA1710551_01926 | Not Available | Positive | 2105891 - 2106727 | 31443.8 |
| abc transporter iron-family atp-binding protein | SAMEA1710551_01927 | Not Available | Positive | 2106728 - 2107723 | 37257.6 |
| abc transporter iron-family permease | SAMEA1710551_01928 | Not Available | Positive | 2107741 - 2109099 | 50438.4 |
| iron abc transporter solute-binding lipoprotein | SAMEA1710551_01929 | Not Available | Positive | 2109180 - 2109434 | 9598.35 |
| dna-binding protein | SAMEA1710551_01930 | Not Available | Positive | 2109626 - 2110156 | 19523.6 |
| ksga/dim1 family 16s ribosomal rna methyltransferase | SAMEA1710551_01931 | Not Available | Positive | 2110327 - 2111196 | 32375.3 |
| putative transmembrane protein | SAMEA1710551_01932 | Not Available | Positive | 2111262 - 2112524 | 50187.9 |
| peptidase | SAMEA1710551_01933 | Not Available | Positive | 2112675 - 2113790 | 39507.4 |
| cation efflux protein | SAMEA1710551_01934 | Not Available | Positive | 2113976 - 2114872 | 32326.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
