Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter cobalt-specific extracellular solute-binding protein | SAMEA1710551_01901 | Not Available | Negative | 2086047 - 2086331 | 9968.15 |
| cobalamin biosynthesis protein | SAMEA1710551_01902 | Not Available | Negative | 2086321 - 2087073 | 26396.5 |
| nitric oxide reductase activation protein | SAMEA1710551_01904 | Not Available | Negative | 2087584 - 2089356 | 68623.4 |
| atpase | SAMEA1710551_01905 | Not Available | Negative | 2089370 - 2090350 | 37149.9 |
| membrane protein | SAMEA1710551_01906 | Not Available | Negative | 2090705 - 2091313 | 22584.5 |
| membrane protein | SAMEA1710551_01909 | Not Available | Positive | 2091872 - 2092063 | 6759.58 |
| arginine decarboxylase | SAMEA1710551_01910 | Not Available | Positive | 2092218 - 2093627 | 52947.3 |
| thymidylate kinase | SAMEA1710551_01911 | Not Available | Positive | 2093748 - 2094437 | 26731.8 |
| dna polymerase iii subunit delta' | SAMEA1710551_01912 | Not Available | Positive | 2094440 - 2095375 | 36002.1 |
| signal peptidase ii | SAMEA1710551_01913 | Not Available | Positive | 2095372 - 2096265 | 33803.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
