Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA1710551_01851 | Not Available | Negative | 2026348 - 2026998 | 25589.9 |
| transposase | SAMEA1710551_01852 | Not Available | Negative | 2027023 - 2027499 | 18514.4 |
| hnh endonuclease | SAMEA1710551_01853 | Not Available | Positive | 2027932 - 2028501 | 22008.7 |
| cell surface protein | SAMEA1710551_01854 | Not Available | Negative | 2028778 - 2029398 | 23159.0 |
| trna (uracil-5-)-methyltransferase | SAMEA1710551_01855 | Not Available | Negative | 2029647 - 2031002 | 51017.0 |
| pseudouridine synthase | SAMEA1710551_01856 | Not Available | Negative | 2031035 - 2031757 | 27344.6 |
| domain of uncharacterised function (duf1904) | SAMEA1710551_01857 | Not Available | Negative | 2031757 - 2032086 | 12715.1 |
| fructose-1,6-bisphosphate aldolase | SAMEA1710551_01858 | Not Available | Positive | 2032416 - 2033342 | 32904.4 |
| sigma-54 dependent transcriptional regulator | SAMEA1710551_01859 | Not Available | Negative | 2033957 - 2035588 | 62090.5 |
| alpha-subunit of electron transfer flavoprotein | SAMEA1710551_01860 | Not Available | Negative | 2036070 - 2037107 | 37150.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
