Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose 1-epimerase | SAMEA1710551_01841 | Not Available | Positive | 2012178 - 2012498 | 12882.3 |
| multimeric flavodoxin wrba | SAMEA1710551_01842 | Not Available | Positive | 2013436 - 2014011 | 21920.1 |
| magnesium-transporting atpase, p-type 1 | SAMEA1710551_01843 | Not Available | Negative | 2014861 - 2017626 | 101530.0 |
| conjugative transposon protein | SAMEA1710551_01844 | Not Available | Negative | 2017791 - 2018102 | 11964.9 |
| transcriptional regulator | SAMEA1710551_01845 | Not Available | Negative | 2018486 - 2018989 | 19166.2 |
| magnesium-transporting atpase, p-type 1 | SAMEA1710551_01846 | Not Available | Negative | 2019005 - 2021668 | 98038.0 |
| atp-binding domain-containing protein | SAMEA1710551_01847 | Not Available | Positive | 2023626 - 2024948 | 51205.4 |
| accessory gene regulator protein b | SAMEA1710551_01848 | Not Available | Positive | 2024991 - 2025578 | 22223.3 |
| autoinducer prepeptide | SAMEA1710551_01849 | Not Available | Positive | 2025591 - 2025725 | 5148.55 |
| transposase, is4 | SAMEA1710551_01850 | Not Available | Negative | 2026104 - 2026397 | 11544.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
