Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase | SAMEA1710551_01821 | Not Available | Negative | 1988969 - 1989901 | 35598.5 |
| helicase, uvrd family | SAMEA1710551_01822 | Not Available | Negative | 1990441 - 1992555 | 81894.0 |
| arac family transcriptional regulator | SAMEA1710551_01823 | Not Available | Negative | 1992802 - 1993662 | 33491.6 |
| nudix family hydrolase | SAMEA1710551_01824 | Not Available | Negative | 1993853 - 1994467 | 23498.9 |
| dioxygenase | SAMEA1710551_01825 | Not Available | Negative | 1994535 - 1994897 | 13925.8 |
| transcriptional regulator | SAMEA1710551_01826 | Not Available | Negative | 1995117 - 1995581 | 17606.2 |
| na+/h+ antiporter, nhaa family | SAMEA1710551_01827 | Not Available | Negative | 1995891 - 1997312 | 50238.4 |
| ornithine racemase | SAMEA1710551_01828 | Not Available | Negative | 1997342 - 1998406 | 39816.6 |
| reactivating factor for adenosylcobalamine-dependent d-ornithine aminomutase | SAMEA1710551_01829 | Not Available | Negative | 1998391 - 1999800 | 51623.6 |
| d-ornithine aminomutase e component | SAMEA1710551_01830 | Not Available | Negative | 1999800 - 2002004 | 82703.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
