Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integral membrane protein | SAMEA1710551_01811 | Not Available | Negative | 1978241 - 1979293 | 40119.8 |
| integral membrane protein | SAMEA1710551_01812 | Not Available | Negative | 1979293 - 1980033 | 27822.6 |
| abc-type multidrug transport system (daunorubicin resistance), atpase component | SAMEA1710551_01813 | Not Available | Negative | 1980038 - 1980796 | 28384.2 |
| padr-like family transcriptional regulator | SAMEA1710551_01814 | Not Available | Negative | 1980898 - 1981620 | 28288.3 |
| beta-lactamase-like hydrolase | SAMEA1710551_01815 | Not Available | Negative | 1981721 - 1982326 | 23068.4 |
| tetr family transcriptional regulator | SAMEA1710551_01816 | Not Available | Positive | 1982506 - 1983144 | 24941.2 |
| two-component response regulator | SAMEA1710551_01817 | Not Available | Positive | 1983260 - 1983922 | 24983.3 |
| two-component sensor histidine kinase | SAMEA1710551_01818 | Not Available | Positive | 1983922 - 1985103 | 44939.1 |
| abc transporter permease | SAMEA1710551_01819 | Not Available | Negative | 1985280 - 1987940 | 99935.2 |
| abc transporter atp-binding protein | SAMEA1710551_01820 | Not Available | Negative | 1987937 - 1988620 | 25404.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
