Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| decarboxylase | SAMEA1710551_00083 | Not Available | Positive | 89124 - 89264 | 5530.52 |
| decarboxylase | SAMEA1710551_00084 | Not Available | Positive | 89264 - 89455 | 6920.45 |
| uncharacterised protein | SAMEA1710551_00085 | Not Available | Positive | 89987 - 90151 | 6137.5 |
| lipoprotein | SAMEA1710551_00086 | Not Available | Negative | 90375 - 91220 | 32786.6 |
| integrase | SAMEA1710551_00087 | Not Available | Negative | 91765 - 92295 | 20950.0 |
| integrase | SAMEA1710551_00088 | Not Available | Negative | 92376 - 92618 | 9396.59 |
| uncharacterised protein | SAMEA1710551_00089 | Not Available | Positive | 93138 - 93290 | 5745.09 |
| uncharacterised protein | SAMEA1710551_00090 | Not Available | Positive | 94160 - 94462 | 11823.6 |
| dna-binding protein | SAMEA1710551_00091 | Not Available | Negative | 97214 - 97402 | 7291.92 |
| uncharacterised protein | SAMEA1710551_00092 | Not Available | Positive | 97590 - 97823 | 8512.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
