Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated cas4 family protein | SAMEA1710551_01729 | Not Available | Positive | 1894132 - 1894626 | 19380.8 |
| crispr-associated cas1 family protein | SAMEA1710551_01730 | Not Available | Positive | 1894661 - 1895659 | 38655.6 |
| crispr-associated cas2 family protein | SAMEA1710551_01731 | Not Available | Positive | 1895870 - 1896160 | 11306.8 |
| transcriptional regulator | SAMEA1710551_01732 | Not Available | Positive | 1896850 - 1897053 | 7542.57 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMEA1710551_01733 | Not Available | Positive | 1897217 - 1898371 | 43047.4 |
| membrane-associated peptidase, m50 family | SAMEA1710551_01734 | Not Available | Positive | 1898384 - 1899388 | 36066.8 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMEA1710551_01735 | Not Available | Positive | 1899571 - 1900626 | 37868.3 |
| uncharacterised protein | SAMEA1710551_01736 | Not Available | Positive | 1900974 - 1901798 | 30891.4 |
| membrane protein | SAMEA1710551_01737 | Not Available | Negative | 1902272 - 1903396 | 42767.8 |
| uncharacterised protein | SAMEA1710551_01738 | Not Available | Positive | 1903593 - 1903817 | 8886.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
