Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | SAMEA1710551_01719 | Not Available | Positive | 1878998 - 1879777 | 28925.6 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | SAMEA1710551_01720 | Not Available | Positive | 1880306 - 1880449 | 5517.68 |
| signaling protein | SAMEA1710551_01721 | Not Available | Positive | 1880835 - 1882655 | 70963.2 |
| uncharacterised protein | SAMEA1710551_01722 | Not Available | Negative | 1882740 - 1883321 | 23547.6 |
| uncharacterised protein | SAMEA1710551_01723 | Not Available | Negative | 1883757 - 1883963 | 8299.48 |
| crispr-associated cas5e family protein | SAMEA1710551_01724 | Not Available | Positive | 1884507 - 1885202 | 27280.2 |
| uncharacterised protein | SAMEA1710551_01725 | Not Available | Positive | 1885214 - 1886953 | 68811.6 |
| uncharacterized protein predicted to be involved in dna repair | SAMEA1710551_01726 | Not Available | Positive | 1886946 - 1887935 | 38042.5 |
| crispr-associated protein cas5, hmari subtype | SAMEA1710551_01727 | Not Available | Positive | 1887937 - 1888677 | 29136.9 |
| crispr-associated helicase cas3 | SAMEA1710551_01728 | Not Available | Positive | 1888701 - 1891259 | 101288.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
