Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SAMEA1710551_01709 | Not Available | Negative | 1870729 - 1871352 | 22733.7 |
| hth-type transcriptional regulator | SAMEA1710551_01710 | Not Available | Positive | 1871540 - 1872184 | 24506.5 |
| transporter | SAMEA1710551_01711 | Not Available | Positive | 1872389 - 1873447 | 41349.9 |
| serine-type d-ala-d-ala carboxypeptidase | SAMEA1710551_01712 | Not Available | Positive | 1873551 - 1874735 | 44133.9 |
| 30s ribosomal protein s2 | SAMEA1710551_01713 | Not Available | Positive | 1874942 - 1875655 | 26844.7 |
| elongation factor ts | SAMEA1710551_01714 | Not Available | Positive | 1875734 - 1876645 | 33142.1 |
| uridylate kinase (uk) (uridine monophosphate kinase) (ump kinase) (umpk) | SAMEA1710551_01715 | Not Available | Positive | 1876729 - 1877433 | 25801.4 |
| ribosome recycling factor | SAMEA1710551_01716 | Not Available | Positive | 1877459 - 1878016 | 21095.5 |
| uncharacterised protein | SAMEA1710551_01717 | Not Available | Positive | 1878019 - 1878222 | 7826.46 |
| undecaprenyl pyrophosphate synthetase | SAMEA1710551_01718 | Not Available | Positive | 1878251 - 1878985 | 27956.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
