Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate kinase signaling protein | SAMEA1710551_01588 | Not Available | Positive | 1734388 - 1737417 | 116900.0 |
| dna helicase, uvrd/rep type | SAMEA1710551_01589 | Not Available | Positive | 1737497 - 1739560 | 80091.4 |
| abc transporter aminoacid-family extracellular solute-binding protein | SAMEA1710551_01591 | Not Available | Positive | 1740480 - 1741295 | 29507.7 |
| abc transporter aminoacid-family permease | SAMEA1710551_01592 | Not Available | Positive | 1741323 - 1742000 | 24557.7 |
| abc transporter aminoacid-family atp-binding protein | SAMEA1710551_01593 | Not Available | Positive | 1742059 - 1742781 | 26571.7 |
| cysteine desulfurase | SAMEA1710551_01594 | Not Available | Positive | 1743428 - 1744579 | 42639.4 |
| thiamine biosynthesis protein thii | SAMEA1710551_01595 | Not Available | Positive | 1744628 - 1745800 | 44269.8 |
| fimbrial protein | SAMEA1710551_01596 | Not Available | Positive | 1745936 - 1746739 | 29719.3 |
| nitroreductase | SAMEA1710551_01597 | Not Available | Positive | 1746982 - 1747623 | 23699.3 |
| pyruvate formate-lyase activating enzyme | SAMEA1710551_01598 | Not Available | Negative | 1748022 - 1748756 | 27573.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
