Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein h | SAMEA1710551_01568 | Not Available | Positive | 1715272 - 1715649 | 14047.4 |
| iron-sulfur protein | SAMEA1710551_01569 | Not Available | Positive | 1715761 - 1717689 | 71557.9 |
| radical sam superfamily protein | SAMEA1710551_01570 | Not Available | Positive | 1717714 - 1718586 | 33185.3 |
| radical sam protein | SAMEA1710551_01571 | Not Available | Positive | 1718583 - 1719521 | 35727.0 |
| biotin/lipoate-protein ligase | SAMEA1710551_01572 | Not Available | Positive | 1719568 - 1720383 | 31193.3 |
| predicted rna-binding protein | SAMEA1710551_01573 | Not Available | Positive | 1720534 - 1720725 | 7209.84 |
| domain of uncharacterised function (duf3842) | SAMEA1710551_01574 | Not Available | Positive | 1720744 - 1721160 | 14447.0 |
| uncharacterised protein | SAMEA1710551_01575 | Not Available | Positive | 1721176 - 1721526 | 13943.0 |
| histidinol-phosphatase | SAMEA1710551_01576 | Not Available | Positive | 1721795 - 1722574 | 30097.6 |
| membrane associated lipoprotein | SAMEA1710551_01577 | Not Available | Negative | 1722890 - 1723765 | 33945.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
