Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SAMEA1710551_00053 | Not Available | Positive | 60347 - 60964 | 23064.6 |
| aspartate racemase racx | SAMEA1710551_00054 | Not Available | Negative | 61158 - 61856 | 26555.2 |
| n-carbamoyl-l-amino acid hydrolase | SAMEA1710551_00055 | Not Available | Negative | 62018 - 63235 | 44458.3 |
| acetyltransferase | SAMEA1710551_00056 | Not Available | Negative | 63427 - 63840 | 16154.6 |
| membrane protein | SAMEA1710551_00057 | Not Available | Negative | 64330 - 64968 | 23807.4 |
| abc transporter multidrug-family atp-binding protein | SAMEA1710551_00058 | Not Available | Negative | 64968 - 65822 | 32542.0 |
| gntr family transcriptional regulator | SAMEA1710551_00059 | Not Available | Negative | 65828 - 66202 | 13993.9 |
| firmicute plasmid replication protein (repl) | SAMEA1710551_00060 | Not Available | Positive | 66569 - 66973 | 15868.4 |
| uncharacterised protein | SAMEA1710551_00061 | Not Available | Positive | 66990 - 67586 | 23858.7 |
| chaperone protein | SAMEA1710551_00062 | Not Available | Positive | 67623 - 70217 | 97637.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
